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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001924.1_3510_3630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3510 - 3630

Intron Length:

121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCGTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

GTGGCCGCACTC

Flanking Amino Acid:

MSFGQSKLYRSEDYGKTFKD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

74.8

0.56

0.9

68.2

31.9

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

38.2

-0.9

2.3

46.54

43.2

Associated Gene:

Gene:

SORT1

Ensembl Gene ID:

ENSAPLG00000021432

Chromosome:

PEDO01001924.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021449

21 - 3965

3945

ENSAPLT00000019877

21 - 3965

3945