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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001924.1_3705_3873_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3705 - 3873

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGATGG

5'SS Class:

major

3'SS Sequence:

TGCTCCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

GAGTGCTGAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

63.4

43.8

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

69.1

0.43

61.8

39.9

Minor 5ss

36.9

-1.5

39.2

Minor BPS

44.8

-0.4

53.49

43.6

Associated Gene:

Gene:

SORT1

Ensembl Gene ID:

ENSAPLG00000021432

Chromosome:

PEDO01001924.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021449

21 - 3965

3945