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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001937.1_813_1107_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

813 - 1107

Intron Length:

295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGCTCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TCCCCACTGACT

Flanking Amino Acid:

MRRVCLPAPQLQGNIFGSFD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

61.3

0.28

52.7

34.2

Major PPT

81.4

0.71

0.8

76.5

32.1

Minor 5ss

41.2

-1

2.5

51.4

45.1

Minor BPS

47.5

-0.1

66.91

43.5

Associated Gene:

Gene:

POU4F3

Ensembl Gene ID:

ENSAPLG00000020531

Chromosome:

PEDO01001937.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017218

21 - 1490

1470