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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001946.1_10240_12838_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10240 - 12838

Intron Length:

2599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTGTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAGAAT

U12 Branch Point Sequence:

TTTCCCTGTACA

Flanking Amino Acid:

NKALQQQLHQEQEQLYLCSG

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.3

1.04

0.8

79.7

35.4

Major BPS

62.9

0.32

1.5

72.3

40.4

Major PPT

81.2

0.7

0.9

76.1

32.5

Minor 5ss

-1.9

3.2

43.9

Minor BPS

62.9

0.4

1.8

78.34

37.4

Associated Gene:

Gene:

PGS1

Ensembl Gene ID:

ENSAPLG00000011921

Chromosome:

PEDO01001946.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012441

1207 - 13858

12652