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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001946.1_12982_13619_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

12982 - 13619

Intron Length:

638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAAGGAT

U12 Branch Point Sequence:

TTTCTTTTGTCT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

83.9

30.3

Major BPS

45.9

-0.2

1.4

41.1

39.7

Major PPT

82.7

0.74

0.8

81.3

30.8

Minor 5ss

40.2

-1.1

49.9

46.4

Minor BPS

45.6

-0.2

3.4

79.65

36.7

Associated Gene:

Gene:

PGS1

Ensembl Gene ID:

ENSAPLG00000011921

Chromosome:

PEDO01001946.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012441

1207 - 13858

12652