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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001946.1_1802_2943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1802 - 2943

Intron Length:

1142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TGAACCTGAATT

Flanking Amino Acid:

SPAEFYELLKVQIKTAKQRV

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

38.3

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

75.8

0.58

0.8

31.9

Minor 5ss

37.3

-1.4

2.8

50.6

45.6

Minor BPS

63.7

0.51

1.5

75.97

40.1

Associated Gene:

Gene:

PGS1

Ensembl Gene ID:

ENSAPLG00000011921

Chromosome:

PEDO01001946.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012441

1207 - 13858

12652