Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001946.1_21187_21652_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21187 - 21652

Intron Length:

466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGGGG

5'SS Class:

major

3'SS Sequence:

GTTGTTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

GGAGTCGCAGCT

Flanking Amino Acid:

KERPDLEDLKANLTKSQNEF

Intron Amino Acid Position:

3183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

44.1

Major BPS

74.6

0.61

65.6

41.4

Major PPT

79.2

0.66

72.9

42.2

Minor 5ss

22.1

-3.2

3.4

28.8

43.7

Minor BPS

37.1

-0.9

2.2

50.22

43.3

Associated Gene:

Gene:

DNAH17

Ensembl Gene ID:

ENSAPLG00000009676

Chromosome:

PEDO01001946.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022840

13554 - 44626

31073

ENSAPLT00000010186

13554 - 44626

31073