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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001946.1_27656_27813_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27656 - 27813

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GGACCTCAGCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTCAG

U12 Branch Point Sequence:

TCTCCCAGGACC

Flanking Amino Acid:

LTDTCKKFFDELVFAKPNIY

Intron Amino Acid Position:

2327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.8

34.4

Major BPS

49.8

-0

1.5

59.3

39.1

Major PPT

42.1

-0.4

1.7

35.8

40.5

Minor 5ss

44.3

-0.6

2.9

62.8

41.9

Minor BPS

49.7

-0

1.8

65.51

39.8

Associated Gene:

Gene:

DNAH17

Ensembl Gene ID:

ENSAPLG00000009676

Chromosome:

PEDO01001946.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010186

13554 - 44626

31073

ENSAPLT00000022840

13554 - 44626

31073