Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001946.1_30724_30848_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30724 - 30848

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGCCC

5'SS Class:

major

3'SS Sequence:

TGGTTCCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCGGAG

U12 Branch Point Sequence:

GCCTTCGGAGCT

Flanking Amino Acid:

AFGGAMFQDQLVDYRVEFSK

Intron Amino Acid Position:

1976

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

63.1

39.8

Major BPS

-0.1

1.7

51.1

46.3

Major PPT

79.1

0.66

0.9

41.4

Minor 5ss

30.9

-2.2

3.4

42.7

44.4

Minor BPS

41.6

-0.5

2.2

56.65

45.8

Associated Gene:

Gene:

DNAH17

Ensembl Gene ID:

ENSAPLG00000009676

Chromosome:

PEDO01001946.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022840

13554 - 44626

31073

ENSAPLT00000010186

13554 - 44626

31073