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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001946.1_31132_31248_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
31132 - 31248

Intron Length:
117

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCC|GTGAGCATG

5'SS Class:
major

3'SS Sequence:
ATCCCTTCCACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCCCAT

U12 Branch Point Sequence:
ATCCCTTCCACA

Flanking Amino Acid:
YINPADLGWNPVVTSWIEKR

Intron Amino Acid Position:
1881

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
60.4
0.25
1.3
60
46.2

Major BPS
59.7
0.24
1.3
68.6
38.9

Major PPT
74.5
0.55
0.8
68.4
31.2

Minor 5ss
39.4
-1.2
3
53.3
43.9

Minor BPS
46.9
-0.2
1.9
59.18
40.8

Associated Gene:

Gene:
DNAH17

Ensembl Gene ID:

Chromosome:
PEDO01001946.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13554 - 44626
31073

13554 - 44626
31073