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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001946.1_32318_32493_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

32318 - 32493

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCGCAGGCA

5'SS Class:

weak_major

3'SS Sequence:

GTCCGTGCTGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCATTAA

U12 Branch Point Sequence:

AGATCATTAAGC

Flanking Amino Acid:

KRDLNFEKVWLKLQAEESFV

Intron Amino Acid Position:

1707

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.9

0.07

1.3

51.5

36.2

Major BPS

0.32

1.1

54.3

41.1

Major PPT

48.6

-0

1.7

53.4

41.5

Minor 5ss

11.6

-4.4

3.6

11.6

28.4

Minor BPS

0.11

1.9

64.1

40.7

Associated Gene:

Gene:

DNAH17

Ensembl Gene ID:

ENSAPLG00000009676

Chromosome:

PEDO01001946.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022840

13554 - 44626

31073

ENSAPLT00000010186

13554 - 44626

31073