Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001946.1_34990_35071_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34990 - 35071

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGGCTC

5'SS Class:

major

3'SS Sequence:

GGCCTCGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

CAGCTCTGAGCC

Flanking Amino Acid:

PRLVITPLTDRCYITLTQSL

Intron Amino Acid Position:

1442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

59.8

42.2

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

60.4

0.24

49.8

39.3

Minor 5ss

34.4

-1.8

3.7

50.7

Minor BPS

45.4

-0.3

1.7

49.58

40.5

Associated Gene:

Gene:

DNAH17

Ensembl Gene ID:

ENSAPLG00000009676

Chromosome:

PEDO01001946.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022840

13554 - 44626

31073

ENSAPLT00000010186

13554 - 44626

31073