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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001946.1_35233_35641_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

35233 - 35641

Intron Length:

409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAAGTT

5'SS Class:

major

3'SS Sequence:

GGATGCCCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCAGAA

U12 Branch Point Sequence:

CGCTCCCCATCA

Flanking Amino Acid:

DVVAKMIVAKVESAQAFTWQ

Intron Amino Acid Position:

1389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

72.3

37.6

Major BPS

56.1

0.15

52.7

34.2

Major PPT

59.9

0.22

51.2

39.1

Minor 5ss

34.3

-1.8

3.9

55.2

Minor BPS

43.4

-0.5

2.1

53.03

44.9

Associated Gene:

Gene:

DNAH17

Ensembl Gene ID:

ENSAPLG00000009676

Chromosome:

PEDO01001946.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022840

13554 - 44626

31073