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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001946.1_41117_44382_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41117 - 44382

Intron Length:

3266

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCA|GCAGGAGCG

5'SS Class:

weak_major

3'SS Sequence:

AGAGGAGGCTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCAGCAA

U12 Branch Point Sequence:

CGTGCAGCAAGA

Flanking Amino Acid:

LLCPALGWDGRQAGEGGSVQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.8

0.16

1.4

55.7

40.4

Major BPS

39.6

-0.6

1.4

39.7

40.4

Major PPT

38.5

-0.6

1.6

28.2

41.1

Minor 5ss

21.2

-3.3

4.2

35.3

Minor BPS

35.1

-1.1

2.4

45.01

43.8

Associated Gene:

Gene:

DNAH17

Ensembl Gene ID:

ENSAPLG00000009676

Chromosome:

PEDO01001946.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022840

13554 - 44626

31073

ENSAPLT00000010186

13554 - 44626

31073