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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001946.1_43399_43689_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43399 - 43689

Intron Length:

291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TCTTCCACCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCCAC

U12 Branch Point Sequence:

GTCTCTTCCACC

Flanking Amino Acid:

IREVEDSKKPNCFELYIPDN

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.3

60.6

38.8

Major BPS

55.1

0.13

1.3

67.8

38.2

Major PPT

75.2

0.57

0.8

66.7

34.1

Minor 5ss

30.4

-2.2

3.1

40.5

38.7

Minor BPS

49.4

-0

62.91

42.8

Associated Gene:

Gene:

CYTH1

Ensembl Gene ID:

ENSAPLG00000020931

Chromosome:

PEDO01001946.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043903

41821 - 47325

5505