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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001946.1_43762_43955_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43762 - 43955

Intron Length:

194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTCAGTGGC

5'SS Class:

major

3'SS Sequence:

TTGGCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAA

U12 Branch Point Sequence:

TGCGACTGAAGC

Flanking Amino Acid:

NCLYYFEYTTDKEPRGIIPL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.3

63.6

42.3

Major BPS

56.6

0.16

1.2

49.3

Major PPT

68.5

0.42

0.9

58.8

38.3

Minor 5ss

28.9

-2.4

36.3

40.6

Minor BPS

44.4

-0.4

52.78

44.3

Associated Gene:

Gene:

CYTH1

Ensembl Gene ID:

ENSAPLG00000020931

Chromosome:

PEDO01001946.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043903

41821 - 47325

5505