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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001946.1_44033_46756_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44033 - 46756

Intron Length:

2724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAA

U12 Branch Point Sequence:

CGGTGCCCAACA

Flanking Amino Acid:

PDREGWLLKLGGRVKTWKRR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

49.1

-0

1.3

58.4

40.3

Major PPT

77.3

0.61

0.8

68.8

37.2

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

42.9

-0.5

2.2

52.98

44.9

Associated Gene:

Gene:

CYTH1

Ensembl Gene ID:

ENSAPLG00000020931

Chromosome:

PEDO01001946.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043903

41821 - 47325

5505