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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001946.1_6443_10090_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6443 - 10090

Intron Length:

3648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCACAC

U12 Branch Point Sequence:

TCTGCCACACTT

Flanking Amino Acid:

SRAGWTFHAKGLWLYLAGSN

Intron Amino Acid Position:

450

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

75.9

34.8

Major BPS

-0.3

1.1

48.6

36.6

Major PPT

86.9

0.83

0.7

81.7

30.4

Minor 5ss

38.3

-1.3

3.1

50.9

45.7

Minor BPS

44.2

-0.3

2.1

64.6

46.2

Associated Gene:

Gene:

PGS1

Ensembl Gene ID:

ENSAPLG00000011921

Chromosome:

PEDO01001946.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012441

1207 - 13858

12652