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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001969.1_2585_4190_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2585 - 4190

Intron Length:

1606

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCCGGACGG

5'SS Class:

major

3'SS Sequence:

GCTGGGCCCACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGTGGC

U12 Branch Point Sequence:

CTGGGCCCACAG

Flanking Amino Acid:

VMEYVEGAIQAGGCSPAFTC

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.3

0.27

1.3

44.8

42.3

Major BPS

21.3

-1.8

34.5

43.7

Major PPT

59.2

0.21

49.4

39.4

Minor 5ss

14.6

-4.1

3.4

27.9

Minor BPS

29.2

-1.7

28.78

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016576

Chromosome:

PEDO01001969.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020467

61 - 4231

4171