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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001978.1_1066_1291_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1066 - 1291

Intron Length:
226

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTGTTC

5'SS Class:
major

3'SS Sequence:
TGTCCCACTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTATAAC

U12 Branch Point Sequence:
GCCTGTATAACA

Flanking Amino Acid:
VTKAVLTRIQVCETPLMYLV

Intron Amino Acid Position:
46

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.4
0.51
1.1
66.9
39.5

Major BPS
60.2
0.25
1.3
64
39.8

Major PPT
74.2
0.54
0.9
67
33.9

Minor 5ss
40.3
-1.1
3.5
59
45.8

Minor BPS
46.9
-0.2
2
56.27
43.2

Associated Gene:

Gene:
MTG1

Ensembl Gene ID:

Chromosome:
PEDO01001978.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

263 - 3190
2928