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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001978.1_1389_1594_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1389 - 1594

Intron Length:

206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAA

U12 Branch Point Sequence:

GGTGCCGGGACT

Flanking Amino Acid:

VETGMKLALCGAIRDHLVGE

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

68.6

37.4

Major BPS

49.7

-0

1.3

43.1

41.8

Major PPT

80.7

0.69

0.7

72.1

32.5

Minor 5ss

38.4

-1.3

3.1

47.7

42.5

Minor BPS

45.4

-0.2

2.3

65.51

44.8

Associated Gene:

Gene:

MTG1

Ensembl Gene ID:

ENSAPLG00000014353

Chromosome:

PEDO01001978.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046306

263 - 3190

2928

ENSAPLT00000014962

96 - 2101

2006