Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001978.1_1677_1750_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1677 - 1750

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCATG

5'SS Class:

major

3'SS Sequence:

GTCCTTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGCCAC

U12 Branch Point Sequence:

GTGGCAGCCACG

Flanking Amino Acid:

LYTLNRQQQFGYVQHYGLPE

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

68.8

43.8

Major BPS

42.9

-0.4

1.2

45.5

37.5

Major PPT

72.4

0.51

68.8

37.2

Minor 5ss

37.1

-1.5

40.5

45.5

Minor BPS

32.1

-1.5

2.4

37.09

44.9

Associated Gene:

Gene:

MTG1

Ensembl Gene ID:

ENSAPLG00000014353

Chromosome:

PEDO01001978.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046306

263 - 3190

2928

ENSAPLT00000014962

96 - 2101

2006