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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002027.1_2263_7071_F

Intron Information:

Intron Rank:

133935

Intron Class:

major

Intron Phase:

Intron Coordinates:

2263 - 7071

Intron Length:

4809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TTGGGTTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

AGATCTAAAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

67.6

40.3

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

78.3

0.64

69.2

46.1

Minor 5ss

49.3

-0

2.5

64.8

46.5

Minor BPS

44.1

-0.4

1.9

52.84

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022012

Chromosome:

PEDO01002027.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041185

1778 - 7622

5845