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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002033.1_469_583_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

469 - 583

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAG

U12 Branch Point Sequence:

GCAGCGTTATCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

72.6

38.9

Major BPS

64.3

0.36

1.6

41.2

Major PPT

74.9

0.56

0.8

73.6

31.4

Minor 5ss

31.3

-2.1

3.3

40.9

45.3

Minor BPS

43.9

-0.4

2.3

52.43

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009541

Chromosome:

PEDO01002033.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009930

21 - 1933

1913