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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002048.1_6125_7147_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6125 - 7147

Intron Length:

1023

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCTTGGGAA

5'SS Class:

weak_major

3'SS Sequence:

TTAGATGTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTAGAT

U12 Branch Point Sequence:

GTGGGTTTAAGC

Flanking Amino Acid:

GNGDLGWGELHVSPSFPPLS

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.5

0.23

1.3

50.9

43.2

Major BPS

61.4

0.28

1.3

60.7

45.9

Major PPT

0.27

1.2

64.3

45.7

Minor 5ss

20.8

-3.4

3.9

38.4

Minor BPS

45.5

-0.3

2.1

53.95

44.5

Associated Gene:

Gene:

NTSR1

Ensembl Gene ID:

ENSAPLG00000003391

Chromosome:

PEDO01002048.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003452

5336 - 7483

2148