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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002050.1_4659_4817_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4659 - 4817

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTTC

5'SS Class:

strong_major

3'SS Sequence:

CTGTGCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

GCGTCCCCACGG

Flanking Amino Acid:

GHGSLELGCSEDWLVRKVKV

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.8

79.1

30.7

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

0.43

0.9

62.1

34.8

Minor 5ss

35.8

-1.6

3.4

49.2

47.3

Minor BPS

36.3

-1.1

2.1

36.62

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023444

Chromosome:

PEDO01002050.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018686

2808 - 5371

2564