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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002057.1_1036_2088_F

Intron Information:

Intron Rank:

131038

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1036 - 2088

Intron Length:

1053

Sequence Information:

Terminal Dinucleotides:

GT-TG

5'SS Sequence:

ACA|GTACAGCTC

5'SS Class:

weak_major

3'SS Sequence:

GAGGTTTAGGTTG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTAAA

U12 Branch Point Sequence:

ATGGGCTAAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.1

46.3

42.1

Major BPS

52.4

0.06

1.3

55.6

40.2

Major PPT

-0.9

3.1

39.8

43.7

Minor 5ss

35.8

-1.6

3.8

55.1

43.6

Minor BPS

43.2

-0.4

2.3

61.28

48.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020392

Chromosome:

PEDO01002057.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029933

21 - 2475

2455