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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002060.1_245_1124_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

245 - 1124

Intron Length:

880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

GGAAGTGAAGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGTTAAA

U12 Branch Point Sequence:

TTGCTAGGAAGT

Flanking Amino Acid:

VLRNKKLRNAELPPLWVITE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.2

39.6

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

39.1

-0.6

1.7

40.8

Minor 5ss

-2.5

33.4

41.6

Minor BPS

38.3

-0.8

2.3

58.84

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022946

Chromosome:

PEDO01002060.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020382

70 - 1264

1195