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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002087.1_1009_1116_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1009 - 1116

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

GCCGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCCCAC

U12 Branch Point Sequence:

CCCACGGCCAGC

Flanking Amino Acid:

PLAAYSYFQIGAIQSFAGFT

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

55.1

43.9

Major BPS

41.9

-0.5

1.3

43.8

40.8

Major PPT

65.2

0.34

0.9

57.7

33.3

Minor 5ss

23.7

-3

3.3

29.1

43.5

Minor BPS

23.7

-2

2.4

25.78

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024166

Chromosome:

PEDO01002087.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021851

72 - 2084

2013