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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002096.1_2870_3001_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2870 - 3001

Intron Length:
132

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGGGTCGG

5'SS Class:
major

3'SS Sequence:
CGTGGTGCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCTGCAT

U12 Branch Point Sequence:
CTTTTTTTCCCC

Flanking Amino Acid:
HMALFYPERVRAVASLNTPY

Intron Amino Acid Position:
263

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.9
0.66
1
59.7
46.7

Major BPS
50.1
0
1.4
63
43.2

Major PPT
61.5
0.26
1
53.5
41.5

Minor 5ss
26.8
-2.7
2.9
31.8
42.6

Minor BPS
41.2
-0.6
3.5
64.58
42.1

Associated Gene:

Gene:
EPHX2

Ensembl Gene ID:

Chromosome:
PEDO01002096.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26 - 4242
4217

21 - 4246
4226

21 - 4246
4226