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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002096.1_4101_4169_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
4101 - 4169

Intron Length:
69

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAT|GTGGGGTTT

5'SS Class:
major

3'SS Sequence:
TCCTCGTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTCCAC

U12 Branch Point Sequence:
ACGTCTCCACCC

Flanking Amino Acid:
YYVQRRVGTMMGPLNWYRNM

Intron Amino Acid Position:
272

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.7
0.39
1.1
68.5
38.7

Major BPS
54.8
0.12
1.3
66.4
39.9

Major PPT
73.3
0.52
0.8
64.7
36.5

Minor 5ss
38.3
-1.3
3.8
58.9
46.2

Minor BPS
41.8
-0.6
2
49.15
41.4

Associated Gene:

Gene:
EPHX2

Ensembl Gene ID:

Chromosome:
PEDO01002096.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

144 - 4242
4099

482 - 4242
3761