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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002109.1_1883_1960_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1883 - 1960

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

GTGCCATCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAT

U12 Branch Point Sequence:

CCGGGCTGAGCC

Flanking Amino Acid:

EQEKMLVAVKALKEVTESAR

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

47.8

-0.1

1.6

58.2

48.3

Major PPT

60.4

0.23

1.1

54.9

40.4

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

39.5

-0.8

42.23

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020046

Chromosome:

PEDO01002109.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032409

89 - 4989

4901