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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002109.1_4599_4803_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4599 - 4803

Intron Length:

205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

TGACCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

AAATTTTGACCT

Flanking Amino Acid:

QPWYQLSNTEAIECITQGRE

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.8

38.1

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

68.7

0.42

0.9

62.2

34.4

Minor 5ss

-0.9

49.2

Minor BPS

48.7

-0

1.7

64.85

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020046

Chromosome:

PEDO01002109.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032409

89 - 4989

4901