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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002109.1_9501_11955_F

Intron Information:

Intron Rank:

135765

Intron Class:

major

Intron Phase:

Intron Coordinates:

9501 - 11955

Intron Length:

2455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CGTCCCCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAA

U12 Branch Point Sequence:

CCCGGCTCAGCG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

76.1

33.6

Major BPS

54.3

0.11

1.4

49.1

46.3

Major PPT

68.4

0.41

61.5

34.9

Minor 5ss

32.3

-2

3.3

44.3

43.6

Minor BPS

37.2

-1.1

2.1

34.42

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023101

Chromosome:

PEDO01002109.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046904

8982 - 12155

3174

ENSAPLT00000031165

8982 - 12155

3174