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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002113.1_15033_16388_F

Intron Information:

Intron Rank:

136142

Intron Class:

major

Intron Phase:

Intron Coordinates:

15033 - 16388

Intron Length:

1356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACACAA

U12 Branch Point Sequence:

CCAGACACAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.5

32.9

Major BPS

47.2

-0.1

1.1

52.9

34.1

Major PPT

0.56

0.8

68.7

31.7

Minor 5ss

28.5

-2.5

3.2

31.7

42.6

Minor BPS

40.5

-0.7

1.9

45.31

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023358

Chromosome:

PEDO01002113.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019125

14543 - 16964

2422