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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002113.1_3195_3396_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
3195 - 3396

Intron Length:
202

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGTGAGCG

5'SS Class:
major

3'SS Sequence:
GTGCCCTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCCTGAG

U12 Branch Point Sequence:
CCAGCCTGAGCT

Flanking Amino Acid:
SMKTALQQLERIDKSKALSL

Intron Amino Acid Position:
424

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.7
0.63
1
61.2
37.5

Major BPS
44.9
-0.3
1.6
39
42.9

Major PPT
67.7
0.4
0.9
58.1
38.4

Minor 5ss
31.4
-2.1
3.2
38.7
46.6

Minor BPS
47.7
-0
1.8
61.43
47.9

Associated Gene:

Gene:
PDE1B

Ensembl Gene ID:

Chromosome:
PEDO01002113.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

96 - 7164
7069

96 - 7164
7069