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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002118.1_1465_2484_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1465 - 2484

Intron Length:

1020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGCATCG

5'SS Class:

weak_major

3'SS Sequence:

GCATCTCGGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TTTGGGAGAAAT

Flanking Amino Acid:

CPCGIGGGYGAILCQLGAAK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.8

0.16

1.3

47.9

43.7

Major BPS

0.72

38.9

Major PPT

44.5

-0.3

1.7

46.2

41.3

Minor 5ss

-0.9

3.2

48.1

47.6

Minor BPS

36.9

-0.9

2.6

62.92

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017982

Chromosome:

PEDO01002118.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025457

1195 - 3543

2349