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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002131.1_773_3162_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

773 - 3162

Intron Length:

2390

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAT|GCCATGGGC

5'SS Class:

weak_major

3'SS Sequence:

GGAGATGAGGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGGAGAT

U12 Branch Point Sequence:

CCGCCCAGAAGG

Flanking Amino Acid:

TGGKQPRGAHSCLEAPLQKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.4

0.13

1.4

60.5

38.1

Major BPS

46.1

-0.2

1.2

38.2

41.7

Major PPT

42.6

-0.4

1.2

30.3

40.5

Minor 5ss

17.2

-3.8

3.9

28.2

36.5

Minor BPS

39.9

-0.9

1.9

38.3

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027746

Chromosome:

PEDO01002131.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022254

437 - 3243

2807