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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002180.1_4983_5090_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4983 - 5090

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGGGAC

5'SS Class:

major

3'SS Sequence:

TCCTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

TTAACCTCACTC

Flanking Amino Acid:

MGLKPGRDQCVISVHLKKD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.1

56.5

36.8

Major BPS

63.6

0.34

65.3

32.1

Major PPT

88.4

0.86

0.7

83.9

24.2

Minor 5ss

26.1

-2.8

3.5

32.4

42.7

Minor BPS

-0

1.9

64.42

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020071

Chromosome:

PEDO01002180.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025808

4955 - 7111

2157