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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002196.1_523_874_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

523 - 874

Intron Length:

352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTGAGCACC

5'SS Class:

weak_major

3'SS Sequence:

GCTCTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

AGCCCCTGAGCT

Flanking Amino Acid:

VRSMGDAGQSRAERQRLFKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.22

1.3

56.7

42.7

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

72.3

0.5

0.8

65.6

30.3

Minor 5ss

36.1

-1.6

2.8

38.8

Minor BPS

49.7

0.06

1.7

66.16

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027290

Chromosome:

PEDO01002196.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031379

366 - 3364

2999