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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002225.1_31119_31202_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31119 - 31202

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAG

U12 Branch Point Sequence:

TTGAGCTCAGCC

Flanking Amino Acid:

PRGVDPSRKEQHLSDQDFQA

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

48.8

-0

1.5

57.1

41.8

Major PPT

84.5

0.78

0.7

77.5

31.3

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

-0.3

2.2

59.45

45.3

Associated Gene:

Gene:

VIL1

Ensembl Gene ID:

ENSAPLG00000025266

Chromosome:

PEDO01002225.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025622

31005 - 33199

2195