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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002225.1_31278_31469_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

31278 - 31469

Intron Length:

192

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCAGCTCGT

5'SS Class:

major

3'SS Sequence:

CGCCAAGCTGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

CCACCCTGACCC

Flanking Amino Acid:

SRAGGHQQHGTFPLHVLVNT

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.8

0.33

1.3

59.8

44.5

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

45.1

-0.2

1.7

42.6

37.3

Minor 5ss

29.3

-2.4

4.1

40.9

45.4

Minor BPS

47.4

-0.2

1.8

53.45

43.9

Associated Gene:

Gene:

VIL1

Ensembl Gene ID:

ENSAPLG00000025266

Chromosome:

PEDO01002225.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025622

31005 - 33199

2195