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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002225.1_32443_32556_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32443 - 32556

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTACC

5'SS Class:

strong_major

3'SS Sequence:

GCTCGCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

GGACGGGTGACA

Flanking Amino Acid:

PNCCYLWYGKGCSGDEREMA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

74.9

35.3

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

0.52

0.9

65.4

36.2

Minor 5ss

30.2

-2.3

2.9

36.9

40.4

Minor BPS

33.7

-1.2

2.6

41.97

38.8

Associated Gene:

Gene:

VIL1

Ensembl Gene ID:

ENSAPLG00000025266

Chromosome:

PEDO01002225.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025622

31005 - 33199

2195