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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002225.1_32737_33106_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32737 - 33106

Intron Length:

370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAATC

5'SS Class:

strong_major

3'SS Sequence:

GTGTTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAA

U12 Branch Point Sequence:

ACATCCCAACCC

Flanking Amino Acid:

KVNRIIYIWQGGTSRAGSTE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

84.1

26.4

Major BPS

54.3

0.11

1.2

64.5

33.7

Major PPT

70.9

0.47

61.8

44.4

Minor 5ss

32.6

-2

42.8

44.4

Minor BPS

43.6

-0.5

2.1

54.06

43.6

Associated Gene:

Gene:

VIL1

Ensembl Gene ID:

ENSAPLG00000025266

Chromosome:

PEDO01002225.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025622

31005 - 33199

2195