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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002228.1_12167_12682_R

Intron Information:

Intron Rank:

138551

Intron Class:

major

Intron Phase:

Intron Coordinates:

12167 - 12682

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGTGGG

5'SS Class:

major

3'SS Sequence:

CTCTCCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAA

U12 Branch Point Sequence:

ATGTCAATAGGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

58.2

46.8

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

74.3

0.55

0.7

65.5

30.4

Minor 5ss

30.6

-2.2

3.3

31.6

42.7

Minor BPS

43.1

-0.4

2.2

64.71

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022020

Chromosome:

PEDO01002228.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048368

10112 - 12979

2868