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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002228.1_3980_5370_R

Intron Information:

Intron Rank:

134832

Intron Class:

major

Intron Phase:

Intron Coordinates:

3980 - 5370

Intron Length:

1391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

CCCACCTCACTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.8

38.1

Major BPS

63.6

0.34

65.3

32.1

Major PPT

77.5

0.62

0.7

72.5

25.7

Minor 5ss

40.1

-1.1

3.1

55.9

48.3

Minor BPS

44.1

-0.4

1.8

46.42

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019869

Chromosome:

PEDO01002228.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039605

3606 - 6595

2990