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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002228.1_4157_5370_R

Intron Information:

Intron Rank:

134831

Intron Class:

major

Intron Phase:

Intron Coordinates:

4157 - 5370

Intron Length:

1214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

ATCTCCTAACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.8

38.1

Major BPS

70.2

0.5

1.1

77.2

Major PPT

81.8

0.72

0.7

76.1

Minor 5ss

40.1

-1.1

3.1

55.9

48.3

Minor BPS

58.6

0.35

77.84

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019869

Chromosome:

PEDO01002228.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023053

3606 - 6595

2990