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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002238.1_2833_3168_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2833 - 3168

Intron Length:

336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

CCTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CCCCGCTCACCC

Flanking Amino Acid:

RHAWTWHQCHRHFHSIEVFT

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

62.1

38.4

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

0.5

0.8

65.4

30.4

Minor 5ss

27.6

-2.6

3.3

35.7

41.2

Minor BPS

39.7

-0.8

2.1

43.27

44.5

Associated Gene:

Gene:

LOXL4

Ensembl Gene ID:

ENSAPLG00000030863

Chromosome:

PEDO01002238.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021962

2353 - 3988

1636