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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002238.1_3285_3363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3285 - 3363

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

CCATTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CGTTCCTCACGT

Flanking Amino Acid:

FCLEDTNCPEGLQRRFACAN

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

64.7

Major BPS

72.4

0.56

73.5

32.5

Major PPT

0.45

0.9

61.1

39.9

Minor 5ss

31.2

-2.1

3.4

34.3

Minor BPS

48.2

-0

2.1

68.65

47.8

Associated Gene:

Gene:

LOXL4

Ensembl Gene ID:

ENSAPLG00000030863

Chromosome:

PEDO01002238.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021962

2353 - 3988

1636