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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002238.1_3501_3704_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3501 - 3704

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGCA

5'SS Class:

major

3'SS Sequence:

TTGCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCACAA

U12 Branch Point Sequence:

TGCCCCCAGACG

Flanking Amino Acid:

DVPPGSYTFQVVVNPKHEVA

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

66.9

38.7

Major BPS

44.3

-0.3

1.2

46.7

38.9

Major PPT

74.2

0.54

0.8

65.8

35.9

Minor 5ss

28.4

-2.5

3.6

38.8

46.4

Minor BPS

-0.6

49.82

43.9

Associated Gene:

Gene:

LOXL4

Ensembl Gene ID:

ENSAPLG00000030863

Chromosome:

PEDO01002238.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021962

2353 - 3988

1636